Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn1Q8K445 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.16■□□□□ 0.66
Clrn1Q8K445 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Clrn1Q8K445 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Clrn1Q8K445 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn1Q8K445 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn1Q8K445 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Clrn1Q8K445 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Clrn1Q8K445 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.14■□□□□ 0.65
Clrn1Q8K445 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Gm22238-201ENSMUST00000175222 88 ntBASIC19.14■□□□□ 0.65
Clrn1Q8K445 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Clrn1Q8K445 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Gm7143-201ENSMUST00000222811 859 ntBASIC19.13■□□□□ 0.65
Clrn1Q8K445 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Clrn1Q8K445 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Clrn1Q8K445 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Clrn1Q8K445 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Clrn1Q8K445 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clrn1Q8K445 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Clrn1Q8K445 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Clrn1Q8K445 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Clrn1Q8K445 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
Clrn1Q8K445 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Clrn1Q8K445 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Clrn1Q8K445 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC19.07■□□□□ 0.64
Clrn1Q8K445 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
Clrn1Q8K445 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Gm9870-201ENSMUST00000063874 645 ntBASIC19.07■□□□□ 0.64
Clrn1Q8K445 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Gm43006-201ENSMUST00000197702 1602 ntBASIC19.07■□□□□ 0.64
Clrn1Q8K445 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
Clrn1Q8K445 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Clrn1Q8K445 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
Clrn1Q8K445 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn1Q8K445 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn1Q8K445 Suz12-201ENSMUST00000017692 4373 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
Clrn1Q8K445 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Clrn1Q8K445 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms