Protein–RNA interactions for Protein: Q8K3A2

Trpt1, tRNA 2'-phosphotransferase 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpt1Q8K3A2 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Gm45444-201ENSMUST00000211394 898 ntBASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Trpt1Q8K3A2 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Gm8093-201ENSMUST00000128935 1892 ntBASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC15.65■□□□□ 0.1
Trpt1Q8K3A2 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC15.64■□□□□ 0.1
Trpt1Q8K3A2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Trpt1Q8K3A2 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Trpt1Q8K3A2 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Snhg20-203ENSMUST00000182811 2153 ntBASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Trpt1Q8K3A2 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC15.61■□□□□ 0.09
Trpt1Q8K3A2 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Trpt1Q8K3A2 Gm5921-201ENSMUST00000075898 882 ntBASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms