Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cchcr1Q8K2I2 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cchcr1Q8K2I2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
Cchcr1Q8K2I2 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Cchcr1Q8K2I2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Cchcr1Q8K2I2 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Cchcr1Q8K2I2 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC24.05■■□□□ 1.44
Cchcr1Q8K2I2 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC24.05■■□□□ 1.44
Cchcr1Q8K2I2 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
Cchcr1Q8K2I2 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Cchcr1Q8K2I2 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Cchcr1Q8K2I2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Cchcr1Q8K2I2 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Cchcr1Q8K2I2 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC24■■□□□ 1.43
Cchcr1Q8K2I2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Cchcr1Q8K2I2 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Cchcr1Q8K2I2 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Gm40881-201ENSMUST00000223397 166 ntBASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Cchcr1Q8K2I2 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Cchcr1Q8K2I2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Gm18755-201ENSMUST00000218030 1099 ntBASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Cchcr1Q8K2I2 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms