Protein–RNA interactions for Protein: Q8CIG0

Depdc1a, DEP domain-containing protein 1A, mousemouse

Predictions only

Length 804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1aQ8CIG0 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1aQ8CIG0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Depdc1aQ8CIG0 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
Depdc1aQ8CIG0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Depdc1aQ8CIG0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Depdc1aQ8CIG0 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Crim1-201ENSMUST00000112498 5995 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Depdc1aQ8CIG0 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Gm8493-201ENSMUST00000196881 489 ntBASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Gm2011-201ENSMUST00000203124 1263 ntBASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Depdc1aQ8CIG0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Gm43173-201ENSMUST00000202246 593 ntBASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Gm6085-201ENSMUST00000182774 1470 ntBASIC23.05■■□□□ 1.28
Depdc1aQ8CIG0 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Depdc1aQ8CIG0 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Depdc1aQ8CIG0 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
Depdc1aQ8CIG0 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Gm43017-201ENSMUST00000198296 752 ntBASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
Depdc1aQ8CIG0 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Spcs1-204ENSMUST00000226782 949 ntBASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
Depdc1aQ8CIG0 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Depdc1aQ8CIG0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Gm27045-201ENSMUST00000182145 1402 ntBASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
Depdc1aQ8CIG0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC22.99■■□□□ 1.27
Depdc1aQ8CIG0 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms