Protein–RNA interactions for Protein: Q8CGP0

Hist3h2bb, Histone H2B type 3-B, mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist3h2bbQ8CGP0 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 AC164883.3-201ENSMUST00000227396 1774 ntBASIC15.52■□□□□ 0.07
Hist3h2bbQ8CGP0 Gm43231-201ENSMUST00000202960 2258 ntBASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Hist3h2bbQ8CGP0 Larp1b-202ENSMUST00000048490 2354 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Zfp821-206ENSMUST00000212964 2033 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 6430628N08Rik-201ENSMUST00000132221 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Hist3h2bbQ8CGP0 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
Hist3h2bbQ8CGP0 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Gm17082-201ENSMUST00000166043 1091 ntBASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 AC158990.1-201ENSMUST00000221450 2016 ntBASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Hist3h2bbQ8CGP0 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Hist3h2bbQ8CGP0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Hist3h2bbQ8CGP0 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hist3h2bbQ8CGP0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hist3h2bbQ8CGP0 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.06
Hist3h2bbQ8CGP0 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Hist3h2bbQ8CGP0 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC15.46■□□□□ 0.06
Hist3h2bbQ8CGP0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Hist3h2bbQ8CGP0 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms