Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC21.85■■□□□ 1.09
Vcpip1Q8CDG3 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.84■■□□□ 1.09
Vcpip1Q8CDG3 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Vcpip1Q8CDG3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Vcpip1Q8CDG3 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Vcpip1Q8CDG3 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Iqck-206ENSMUST00000208658 2891 ntBASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC21.81■■□□□ 1.08
Vcpip1Q8CDG3 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Vcpip1Q8CDG3 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vcpip1Q8CDG3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC21.79■■□□□ 1.08
Vcpip1Q8CDG3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vcpip1Q8CDG3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.79■■□□□ 1.08
Vcpip1Q8CDG3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Vcpip1Q8CDG3 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Gm37035-201ENSMUST00000194809 2148 ntBASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Gm10399-202ENSMUST00000202768 748 ntBASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Vcpip1Q8CDG3 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Gm10232-201ENSMUST00000089221 720 ntBASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Vcpip1Q8CDG3 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
Vcpip1Q8CDG3 Gm45102-201ENSMUST00000207427 857 ntBASIC21.76■■□□□ 1.07
Vcpip1Q8CDG3 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcpip1Q8CDG3 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcpip1Q8CDG3 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcpip1Q8CDG3 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Vcpip1Q8CDG3 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Vcpip1Q8CDG3 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Vcpip1Q8CDG3 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC21.74■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 68.9 ms