Protein–RNA interactions for Protein: Q8CC35

Synpo, Synaptopodin, mousemouse

Known RBP Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SynpoQ8CC35 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
SynpoQ8CC35 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
SynpoQ8CC35 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Gm21956-201ENSMUST00000179946 522 ntBASIC19.52■□□□□ 0.72
SynpoQ8CC35 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
SynpoQ8CC35 Hsf1-207ENSMUST00000228371 2102 ntBASIC19.52■□□□□ 0.72
SynpoQ8CC35 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
SynpoQ8CC35 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SynpoQ8CC35 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
SynpoQ8CC35 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
SynpoQ8CC35 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
SynpoQ8CC35 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.5■□□□□ 0.71
SynpoQ8CC35 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
SynpoQ8CC35 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC19.5■□□□□ 0.71
SynpoQ8CC35 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SynpoQ8CC35 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.49■□□□□ 0.71
SynpoQ8CC35 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.49■□□□□ 0.71
SynpoQ8CC35 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SynpoQ8CC35 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SynpoQ8CC35 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.48■□□□□ 0.71
SynpoQ8CC35 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.48■□□□□ 0.71
SynpoQ8CC35 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SynpoQ8CC35 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.46■□□□□ 0.71
SynpoQ8CC35 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SynpoQ8CC35 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SynpoQ8CC35 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 14.8 ms