Protein–RNA interactions for Protein: Q8CA71

Shisa4, Protein shisa-4, mousemouse

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa4Q8CA71 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Shisa4Q8CA71 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC23.91■■□□□ 1.42
Shisa4Q8CA71 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Shisa4Q8CA71 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC23.89■■□□□ 1.42
Shisa4Q8CA71 Gm43530-201ENSMUST00000195920 274 ntBASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Slc35b2-207ENSMUST00000226086 850 ntBASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Shisa4Q8CA71 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
Shisa4Q8CA71 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
Shisa4Q8CA71 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Shisa4Q8CA71 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Shisa4Q8CA71 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Shisa4Q8CA71 Trp53rka-201ENSMUST00000039007 1880 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 AC140930.3-201ENSMUST00000222935 274 ntBASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
Shisa4Q8CA71 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
Shisa4Q8CA71 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 AC166356.1-201ENSMUST00000228236 1426 ntBASIC23.82■■□□□ 1.4
Shisa4Q8CA71 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
Shisa4Q8CA71 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Appbp2os-202ENSMUST00000206972 447 ntBASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
Shisa4Q8CA71 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
Shisa4Q8CA71 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
Shisa4Q8CA71 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shisa4Q8CA71 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shisa4Q8CA71 Gm8770-201ENSMUST00000121113 1109 ntBASIC23.79■■□□□ 1.4
Shisa4Q8CA71 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
Shisa4Q8CA71 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
Shisa4Q8CA71 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Shisa4Q8CA71 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shisa4Q8CA71 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
Shisa4Q8CA71 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC23.78■■□□□ 1.4
Shisa4Q8CA71 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms