Protein–RNA interactions for Protein: Q8C7R7

Rfx6, DNA-binding protein RFX6, mousemouse

Predictions only

Length 927 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx6Q8C7R7 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Rfx6Q8C7R7 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Rfx6Q8C7R7 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Rfx6Q8C7R7 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Rfx6Q8C7R7 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Rfx6Q8C7R7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.59■□□□□ 0.89
Rfx6Q8C7R7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx6Q8C7R7 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.58■□□□□ 0.89
Rfx6Q8C7R7 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx6Q8C7R7 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC20.58■□□□□ 0.89
Rfx6Q8C7R7 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Rfx6Q8C7R7 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Rfx6Q8C7R7 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Rfx6Q8C7R7 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Rfx6Q8C7R7 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
Rfx6Q8C7R7 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Rfx6Q8C7R7 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 193.6 ms