Protein–RNA interactions for Protein: Q8C6S9

Cfap54, Cilia- and flagella-associated protein 54, mousemouse

Predictions only

Length 3,106 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap54Q8C6S9 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Cfap54Q8C6S9 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cfap54Q8C6S9 Gm10209-201ENSMUST00000203397 1607 ntBASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cfap54Q8C6S9 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Cfap54Q8C6S9 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Gm43530-201ENSMUST00000195920 274 ntBASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Cfap54Q8C6S9 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap54Q8C6S9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap54Q8C6S9 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.83■□□□□ 0.76
Cfap54Q8C6S9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap54Q8C6S9 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cfap54Q8C6S9 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Faim-201ENSMUST00000035038 1019 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
Cfap54Q8C6S9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
Cfap54Q8C6S9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.8■□□□□ 0.76
Cfap54Q8C6S9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.8■□□□□ 0.76
Cfap54Q8C6S9 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cfap54Q8C6S9 Gm7143-201ENSMUST00000222811 859 ntBASIC19.8■□□□□ 0.76
Cfap54Q8C6S9 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap54Q8C6S9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap54Q8C6S9 Gm12933-201ENSMUST00000120203 872 ntBASIC19.79■□□□□ 0.76
Cfap54Q8C6S9 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cfap54Q8C6S9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cfap54Q8C6S9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Nespas-201ENSMUST00000143738 1083 ntBASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Smad6-203ENSMUST00000179458 273 ntBASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Gm10602-201ENSMUST00000098239 609 ntBASIC19.77■□□□□ 0.76
Cfap54Q8C6S9 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cfap54Q8C6S9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap54Q8C6S9 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap54Q8C6S9 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cfap54Q8C6S9 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Cfap54Q8C6S9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cfap54Q8C6S9 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Gm10252-201ENSMUST00000209541 832 ntBASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cfap54Q8C6S9 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Cfap54Q8C6S9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 13 ms