Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Col6a6Q8C6K9 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Col6a6Q8C6K9 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Col6a6Q8C6K9 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Col6a6Q8C6K9 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Col6a6Q8C6K9 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC18.39■□□□□ 0.54
Col6a6Q8C6K9 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.39■□□□□ 0.54
Col6a6Q8C6K9 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
Col6a6Q8C6K9 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Col6a6Q8C6K9 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC18.39■□□□□ 0.54
Col6a6Q8C6K9 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Col6a6Q8C6K9 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Gm42778-201ENSMUST00000199644 553 ntBASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Col6a6Q8C6K9 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Col6a6Q8C6K9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col6a6Q8C6K9 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col6a6Q8C6K9 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.35■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms