Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Gm9870-201ENSMUST00000063874 645 ntBASIC19.32■□□□□ 0.68
Eri3Q8C460 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Eri3Q8C460 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Eri3Q8C460 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Eri3Q8C460 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Eri3Q8C460 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Eri3Q8C460 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Eri3Q8C460 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Eri3Q8C460 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.3■□□□□ 0.68
Eri3Q8C460 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Eri3Q8C460 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Gemin7-203ENSMUST00000119912 653 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Eri3Q8C460 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC19.29■□□□□ 0.68
Eri3Q8C460 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.29■□□□□ 0.68
Eri3Q8C460 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.29■□□□□ 0.68
Eri3Q8C460 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Eri3Q8C460 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Eri3Q8C460 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.28■□□□□ 0.68
Eri3Q8C460 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.28■□□□□ 0.68
Eri3Q8C460 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.28■□□□□ 0.68
Eri3Q8C460 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.28■□□□□ 0.68
Eri3Q8C460 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.28■□□□□ 0.68
Eri3Q8C460 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Eri3Q8C460 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Eri3Q8C460 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Eri3Q8C460 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Eri3Q8C460 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.68
Eri3Q8C460 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Eri3Q8C460 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Eri3Q8C460 Smox-206ENSMUST00000110183 1159 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Eri3Q8C460 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Eri3Q8C460 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Eri3Q8C460 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Eri3Q8C460 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Eri3Q8C460 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Eri3Q8C460 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Eri3Q8C460 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.26■□□□□ 0.67
Eri3Q8C460 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.26■□□□□ 0.67
Eri3Q8C460 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Eri3Q8C460 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.26■□□□□ 0.67
Eri3Q8C460 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Eri3Q8C460 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Eri3Q8C460 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Eri3Q8C460 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Eri3Q8C460 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Eri3Q8C460 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Eri3Q8C460 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Eri3Q8C460 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Eri3Q8C460 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.24■□□□□ 0.67
Eri3Q8C460 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Eri3Q8C460 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.24■□□□□ 0.67
Eri3Q8C460 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Eri3Q8C460 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Eri3Q8C460 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.23■□□□□ 0.67
Eri3Q8C460 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Eri3Q8C460 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Eri3Q8C460 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Eri3Q8C460 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Eri3Q8C460 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Eri3Q8C460 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Eri3Q8C460 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Eri3Q8C460 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Eri3Q8C460 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Eri3Q8C460 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Eri3Q8C460 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Eri3Q8C460 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Eri3Q8C460 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.21■□□□□ 0.67
Eri3Q8C460 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Eri3Q8C460 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Eri3Q8C460 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Eri3Q8C460 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Eri3Q8C460 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms