Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trub1Q8C0D0 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trub1Q8C0D0 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Trub1Q8C0D0 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trub1Q8C0D0 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Trub1Q8C0D0 Bcas2-201ENSMUST00000005830 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 AC152827.1-201ENSMUST00000221143 2189 ntBASIC21.02■□□□□ 0.96
Trub1Q8C0D0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Socs2-202ENSMUST00000119917 948 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Trub1Q8C0D0 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Trub1Q8C0D0 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21■□□□□ 0.95
Trub1Q8C0D0 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Trub1Q8C0D0 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Trub1Q8C0D0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Trub1Q8C0D0 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Bfsp1-201ENSMUST00000028907 2372 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Trub1Q8C0D0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.97■□□□□ 0.95
Trub1Q8C0D0 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Gm9870-201ENSMUST00000063874 645 ntBASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Trub1Q8C0D0 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Gm45102-201ENSMUST00000207427 857 ntBASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Trub1Q8C0D0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Trub1Q8C0D0 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Gm14117-201ENSMUST00000122417 843 ntBASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Trub1Q8C0D0 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms