Protein–RNA interactions for Protein: Q8BY89

Slc44a2, Choline transporter-like protein 2, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc44a2Q8BY89 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Slc44a2Q8BY89 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Wnt10b-201ENSMUST00000023732 2226 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC19.66■□□□□ 0.74
Slc44a2Q8BY89 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Slc44a2Q8BY89 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Slc44a2Q8BY89 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Slc44a2Q8BY89 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.63■□□□□ 0.73
Slc44a2Q8BY89 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Slc44a2Q8BY89 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Slc44a2Q8BY89 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc44a2Q8BY89 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc44a2Q8BY89 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC19.6■□□□□ 0.73
Slc44a2Q8BY89 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC19.6■□□□□ 0.73
Slc44a2Q8BY89 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Slc44a2Q8BY89 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Slc44a2Q8BY89 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc44a2Q8BY89 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Slc44a2Q8BY89 Nsd1-206ENSMUST00000224918 1001 ntBASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Slc44a2Q8BY89 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms