Protein–RNA interactions for Protein: Q8BU04

Ubr7, Putative E3 ubiquitin-protein ligase UBR7, mousemouse

Predictions only

Length 425 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr7Q8BU04 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.66■□□□□ 0.9
Ubr7Q8BU04 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr7Q8BU04 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Ubr7Q8BU04 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.65■□□□□ 0.9
Ubr7Q8BU04 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr7Q8BU04 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Ubr7Q8BU04 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Ubr7Q8BU04 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Ubr7Q8BU04 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Gm6139-201ENSMUST00000079261 882 ntBASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Gm13042-201ENSMUST00000119244 1955 ntBASIC20.62■□□□□ 0.89
Ubr7Q8BU04 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Ubr7Q8BU04 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubr7Q8BU04 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubr7Q8BU04 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubr7Q8BU04 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr7Q8BU04 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr7Q8BU04 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Ubr7Q8BU04 Gm12251-201ENSMUST00000117893 792 ntBASIC20.58■□□□□ 0.89
Ubr7Q8BU04 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr7Q8BU04 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr7Q8BU04 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr7Q8BU04 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubr7Q8BU04 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Mir7075-201ENSMUST00000184187 82 ntBASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.57■□□□□ 0.88
Ubr7Q8BU04 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubr7Q8BU04 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 13.1 ms