Protein–RNA interactions for Protein: Q8BTV2

Cpsf7, Cleavage and polyadenylation specificity factor subunit 7, mousemouse

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf7Q8BTV2 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf7Q8BTV2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.36■□□□□ 0.85
Cpsf7Q8BTV2 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf7Q8BTV2 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cpsf7Q8BTV2 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cpsf7Q8BTV2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Gm5067-201ENSMUST00000170449 1009 ntBASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Cpsf7Q8BTV2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 Gm10420-201ENSMUST00000121713 882 ntBASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.33■□□□□ 0.85
Cpsf7Q8BTV2 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf7Q8BTV2 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cpsf7Q8BTV2 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Cpsf7Q8BTV2 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Cpsf7Q8BTV2 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Hsf1-204ENSMUST00000226872 2104 ntBASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cpsf7Q8BTV2 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cpsf7Q8BTV2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cpsf7Q8BTV2 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf7Q8BTV2 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf7Q8BTV2 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf7Q8BTV2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cpsf7Q8BTV2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cpsf7Q8BTV2 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Cpsf7Q8BTV2 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.27■□□□□ 0.83
Cpsf7Q8BTV2 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf7Q8BTV2 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf7Q8BTV2 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf7Q8BTV2 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC20.26■□□□□ 0.83
Cpsf7Q8BTV2 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cpsf7Q8BTV2 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cpsf7Q8BTV2 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 165.4 ms