Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Cpne3Q8BT60 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
Cpne3Q8BT60 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Cpne3Q8BT60 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Cpne3Q8BT60 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Cpne3Q8BT60 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.5■□□□□ 0.71
Cpne3Q8BT60 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Gm10232-201ENSMUST00000089221 720 ntBASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Cpne3Q8BT60 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
Cpne3Q8BT60 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Gm10399-202ENSMUST00000202768 748 ntBASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cpne3Q8BT60 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cpne3Q8BT60 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.7
Cpne3Q8BT60 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cpne3Q8BT60 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms