Protein–RNA interactions for Protein: Q8BQP8

Rab11fip4, Rab11 family-interacting protein 4, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip4Q8BQP8 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rab11fip4Q8BQP8 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.45■■□□□ 1.18
Rab11fip4Q8BQP8 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Rab11fip4Q8BQP8 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Rab11fip4Q8BQP8 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Rab11fip4Q8BQP8 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC22.42■■□□□ 1.18
Rab11fip4Q8BQP8 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Rab11fip4Q8BQP8 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Gm4430-201ENSMUST00000192413 1943 ntBASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Rab11fip4Q8BQP8 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.39■■□□□ 1.18
Rab11fip4Q8BQP8 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rab11fip4Q8BQP8 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rab11fip4Q8BQP8 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.18
Rab11fip4Q8BQP8 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Rab11fip4Q8BQP8 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Rab11fip4Q8BQP8 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Gm12821-201ENSMUST00000120022 600 ntBASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Golgb1-201ENSMUST00000023534 498 ntBASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC22.37■■□□□ 1.17
Rab11fip4Q8BQP8 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab11fip4Q8BQP8 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC22.36■■□□□ 1.17
Rab11fip4Q8BQP8 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Rab11fip4Q8BQP8 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Rab11fip4Q8BQP8 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Rab11fip4Q8BQP8 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab11fip4Q8BQP8 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Rab11fip4Q8BQP8 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
Rab11fip4Q8BQP8 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.34■■□□□ 1.17
Rab11fip4Q8BQP8 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms