Protein–RNA interactions for Protein: Q8BP99

UPF0500 protein C1orf216 homolog, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q8BP99 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Q8BP99 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Q8BP99 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Gm11847-201ENSMUST00000125165 1119 ntBASIC19.91■□□□□ 0.78
Q8BP99 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.91■□□□□ 0.78
Q8BP99 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.91■□□□□ 0.78
Q8BP99 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Q8BP99 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
Q8BP99 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Q8BP99 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Gm14117-201ENSMUST00000122417 843 ntBASIC19.9■□□□□ 0.78
Q8BP99 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Q8BP99 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Q8BP99 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Q8BP99 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Q8BP99 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Q8BP99 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8BP99 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8BP99 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Q8BP99 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.88■□□□□ 0.77
Q8BP99 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.88■□□□□ 0.77
Q8BP99 Gm5131-201ENSMUST00000212776 1238 ntBASIC19.88■□□□□ 0.77
Q8BP99 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.88■□□□□ 0.77
Q8BP99 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8BP99 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Q8BP99 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Q8BP99 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8BP99 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.87■□□□□ 0.77
Q8BP99 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8BP99 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Q8BP99 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.86■□□□□ 0.77
Q8BP99 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC19.86■□□□□ 0.77
Q8BP99 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.86■□□□□ 0.77
Q8BP99 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Q8BP99 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC19.85■□□□□ 0.77
Q8BP99 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC19.85■□□□□ 0.77
Q8BP99 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Q8BP99 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC19.84■□□□□ 0.77
Q8BP99 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Q8BP99 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Q8BP99 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.84■□□□□ 0.77
Q8BP99 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q8BP99 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q8BP99 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q8BP99 Etf1-202ENSMUST00000180351 108 ntBASIC19.83■□□□□ 0.77
Q8BP99 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.83■□□□□ 0.77
Q8BP99 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.83■□□□□ 0.77
Q8BP99 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Q8BP99 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q8BP99 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q8BP99 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Q8BP99 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
Q8BP99 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q8BP99 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Q8BP99 Gm34220-201ENSMUST00000223001 2709 ntBASIC19.82■□□□□ 0.76
Q8BP99 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Q8BP99 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.82■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms