Protein–RNA interactions for Protein: Q8BMK4

Ckap4, Cytoskeleton-associated protein 4, mousemouse

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4Q8BMK4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Ckap4Q8BMK4 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
Ckap4Q8BMK4 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Ckap4Q8BMK4 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Ckap4Q8BMK4 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Ckap4Q8BMK4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
Ckap4Q8BMK4 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC19.12■□□□□ 0.65
Ckap4Q8BMK4 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Gm16464-201ENSMUST00000117815 1095 ntBASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Ckap4Q8BMK4 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Gm44949-201ENSMUST00000206423 1450 ntBASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Ckap4Q8BMK4 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Ckap4Q8BMK4 Gm8093-201ENSMUST00000128935 1892 ntBASIC19.08■□□□□ 0.65
Ckap4Q8BMK4 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
Ckap4Q8BMK4 Gm13238-201ENSMUST00000117655 780 ntBASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 Ctdsp1-201ENSMUST00000027367 2876 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Ckap4Q8BMK4 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Ckap4Q8BMK4 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
Ckap4Q8BMK4 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.05■□□□□ 0.64
Ckap4Q8BMK4 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Gm10232-201ENSMUST00000089221 720 ntBASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Ckap4Q8BMK4 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms