Protein–RNA interactions for Protein: Q8BLR2

Cpne4, Copine-4, mousemouse

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne4Q8BLR2 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC18.19■□□□□ 0.5
Cpne4Q8BLR2 Golgb1-201ENSMUST00000023534 498 ntBASIC18.19■□□□□ 0.5
Cpne4Q8BLR2 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne4Q8BLR2 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Cpne4Q8BLR2 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Cpne4Q8BLR2 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Gm10657-201ENSMUST00000193528 1031 ntBASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Cpne4Q8BLR2 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Zfp523-202ENSMUST00000073534 2654 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Cpne4Q8BLR2 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Cpne4Q8BLR2 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Cpne4Q8BLR2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Slc16a10-201ENSMUST00000092566 5397 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Gm43034-201ENSMUST00000198678 1364 ntBASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.13■□□□□ 0.49
Cpne4Q8BLR2 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.12■□□□□ 0.49
Cpne4Q8BLR2 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.12■□□□□ 0.49
Cpne4Q8BLR2 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Cpne4Q8BLR2 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
Cpne4Q8BLR2 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Cpne4Q8BLR2 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Cpne4Q8BLR2 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Gm43530-201ENSMUST00000195920 274 ntBASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Krt8-ps-201ENSMUST00000208495 945 ntBASIC18.09■□□□□ 0.49
Cpne4Q8BLR2 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms