Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Smg1Q8BKX6 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Smg1Q8BKX6 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Smg1Q8BKX6 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Smg1Q8BKX6 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC17.52■□□□□ 0.39
Smg1Q8BKX6 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.52■□□□□ 0.39
Smg1Q8BKX6 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.52■□□□□ 0.39
Smg1Q8BKX6 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Smg1Q8BKX6 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Gm7143-201ENSMUST00000222811 859 ntBASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Smg1Q8BKX6 AC165080.2-201ENSMUST00000217491 1530 ntBASIC17.51■□□□□ 0.39
Smg1Q8BKX6 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Gm4430-201ENSMUST00000192413 1943 ntBASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Smg1Q8BKX6 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Smg1Q8BKX6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.48■□□□□ 0.39
Smg1Q8BKX6 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Smg1Q8BKX6 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Smg1Q8BKX6 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.46■□□□□ 0.38
Smg1Q8BKX6 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Smg1Q8BKX6 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Gm43759-201ENSMUST00000196925 1261 ntBASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Smg1Q8BKX6 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC17.44■□□□□ 0.38
Smg1Q8BKX6 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC17.44■□□□□ 0.38
Smg1Q8BKX6 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms