Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.76■■□□□ 1.07
Smarcal1Q8BJL0 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Smarcal1Q8BJL0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Smarcal1Q8BJL0 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.73■■□□□ 1.07
Smarcal1Q8BJL0 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 AC153962.1-201ENSMUST00000218530 1948 ntBASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 Gm27045-201ENSMUST00000182145 1402 ntBASIC21.72■■□□□ 1.07
Smarcal1Q8BJL0 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Smarcal1Q8BJL0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Gm7291-201ENSMUST00000199147 382 ntBASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC21.7■■□□□ 1.06
Smarcal1Q8BJL0 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Smarcal1Q8BJL0 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcal1Q8BJL0 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcal1Q8BJL0 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.69■■□□□ 1.06
Smarcal1Q8BJL0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Smarcal1Q8BJL0 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 AC099934.2-201ENSMUST00000196389 70 ntBASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 AC156953.1-201ENSMUST00000196953 70 ntBASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 AC157822.2-201ENSMUST00000200291 70 ntBASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Gm10129-202ENSMUST00000193100 1316 ntBASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Gm5913-201ENSMUST00000119397 1399 ntBASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Smarcal1Q8BJL0 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gm10849-201ENSMUST00000100397 618 ntBASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gm27405-201ENSMUST00000184201 112 ntBASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC21.67■■□□□ 1.06
Smarcal1Q8BJL0 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Gm42642-201ENSMUST00000200683 355 ntBASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Gm40848-201ENSMUST00000221998 324 ntBASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.66■■□□□ 1.06
Smarcal1Q8BJL0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Gm43403-201ENSMUST00000198011 1786 ntBASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Smarcal1Q8BJL0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms