Protein–RNA interactions for Protein: Q8BHK2

Scn3b, Sodium channel subunit beta-3, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3bQ8BHK2 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Scn3bQ8BHK2 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Scn3bQ8BHK2 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Scn3bQ8BHK2 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Gm6311-201ENSMUST00000073790 878 ntBASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Scn3bQ8BHK2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC18.85■□□□□ 0.61
Scn3bQ8BHK2 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Cog1-202ENSMUST00000063776 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Scn3bQ8BHK2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn3bQ8BHK2 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn3bQ8BHK2 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn3bQ8BHK2 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Scn3bQ8BHK2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Scn3bQ8BHK2 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Gm43545-201ENSMUST00000196765 2779 ntBASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC18.82■□□□□ 0.6
Scn3bQ8BHK2 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Scn3bQ8BHK2 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Scn3bQ8BHK2 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 15.9 ms