Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Slc5a7Q8BGY9 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Slc5a7Q8BGY9 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Slc5a7Q8BGY9 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Gm8093-201ENSMUST00000128935 1892 ntBASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Slc5a7Q8BGY9 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Slc5a7Q8BGY9 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Slc5a7Q8BGY9 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc5a7Q8BGY9 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC17.77■□□□□ 0.44
Slc5a7Q8BGY9 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc5a7Q8BGY9 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc5a7Q8BGY9 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Slc5a7Q8BGY9 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc5a7Q8BGY9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc5a7Q8BGY9 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Slc5a7Q8BGY9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Slc5a7Q8BGY9 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc5a7Q8BGY9 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc5a7Q8BGY9 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc5a7Q8BGY9 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Slc5a7Q8BGY9 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Slc5a7Q8BGY9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Slc5a7Q8BGY9 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Slc5a7Q8BGY9 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc5a7Q8BGY9 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Slc5a7Q8BGY9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Slc5a7Q8BGY9 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Slc5a7Q8BGY9 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Slc5a7Q8BGY9 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms