Protein–RNA interactions for Protein: Q811S7

Ubp1, Upstream-binding protein 1, mousemouse

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubp1Q811S7 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Ubp1Q811S7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.99■□□□□ 0.79
Ubp1Q811S7 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.99■□□□□ 0.79
Ubp1Q811S7 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Ubp1Q811S7 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Ubp1Q811S7 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubp1Q811S7 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubp1Q811S7 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubp1Q811S7 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Ubp1Q811S7 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.96■□□□□ 0.79
Ubp1Q811S7 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Ubp1Q811S7 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Ubp1Q811S7 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC19.94■□□□□ 0.78
Ubp1Q811S7 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.94■□□□□ 0.78
Ubp1Q811S7 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Ubp1Q811S7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.93■□□□□ 0.78
Ubp1Q811S7 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Ubp1Q811S7 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Ubp1Q811S7 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.9■□□□□ 0.78
Ubp1Q811S7 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC19.9■□□□□ 0.78
Ubp1Q811S7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Gm9847-201ENSMUST00000052528 599 ntBASIC19.9■□□□□ 0.78
Ubp1Q811S7 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Ubp1Q811S7 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC19.89■□□□□ 0.77
Ubp1Q811S7 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Ubp1Q811S7 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Ubp1Q811S7 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms