Protein–RNA interactions for Protein: Q80WC3

Tnrc18, Trinucleotide repeat-containing gene 18 protein, mousemouse

Predictions only

Length 2,878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnrc18Q80WC3 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc18Q80WC3 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc18Q80WC3 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC20.72■□□□□ 0.91
Tnrc18Q80WC3 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc18Q80WC3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tnrc18Q80WC3 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Gm10653-202ENSMUST00000139570 835 ntBASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Gm42778-201ENSMUST00000199644 553 ntBASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tnrc18Q80WC3 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
Tnrc18Q80WC3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc18Q80WC3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc18Q80WC3 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tnrc18Q80WC3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
Tnrc18Q80WC3 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Tnrc18Q80WC3 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
Tnrc18Q80WC3 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Gm12527-201ENSMUST00000117967 564 ntBASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Gm13148-201ENSMUST00000118892 745 ntBASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
Tnrc18Q80WC3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Tnrc18Q80WC3 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Tnrc18Q80WC3 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc18Q80WC3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc18Q80WC3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Tnrc18Q80WC3 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
Tnrc18Q80WC3 Gm11421-201ENSMUST00000122124 294 ntBASIC20.64■□□□□ 0.9
Tnrc18Q80WC3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc18Q80WC3 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc18Q80WC3 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc18Q80WC3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc18Q80WC3 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Tnrc18Q80WC3 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.63■□□□□ 0.89
Tnrc18Q80WC3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Tnrc18Q80WC3 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC20.62■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms