Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Prpf40bQ80W14 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC23.44■■□□□ 1.34
Prpf40bQ80W14 Gm42418-201ENSMUST00000182010 1831 ntBASIC23.43■■□□□ 1.34
Prpf40bQ80W14 Gm12504-201ENSMUST00000120860 2231 ntBASIC23.43■■□□□ 1.34
Prpf40bQ80W14 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf40bQ80W14 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.43■■□□□ 1.34
Prpf40bQ80W14 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC23.43■■□□□ 1.34
Prpf40bQ80W14 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Prpf40bQ80W14 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Gm13067-201ENSMUST00000134236 404 ntTSL 5 BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC23.41■■□□□ 1.34
Prpf40bQ80W14 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Prpf40bQ80W14 Gm43173-201ENSMUST00000202246 593 ntBASIC23.4■■□□□ 1.34
Prpf40bQ80W14 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Prpf40bQ80W14 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Prpf40bQ80W14 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Prpf40bQ80W14 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Prpf40bQ80W14 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.34
Prpf40bQ80W14 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.34
Prpf40bQ80W14 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC23.39■■□□□ 1.33
Prpf40bQ80W14 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Prpf40bQ80W14 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 CT025689.6-201ENSMUST00000224991 1104 ntBASIC23.37■■□□□ 1.33
Prpf40bQ80W14 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Prpf40bQ80W14 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Gm37179-201ENSMUST00000194862 823 ntBASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Prpf40bQ80W14 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Gm10493-201ENSMUST00000097270 612 ntBASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Prpf40bQ80W14 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Cdc34b-202ENSMUST00000188741 1252 ntBASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC23.34■■□□□ 1.33
Prpf40bQ80W14 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf40bQ80W14 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
Prpf40bQ80W14 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms