Protein–RNA interactions for Protein: Q80V63

Prdm4, PR domain zinc finger protein 4, mousemouse

Predictions only

Length 803 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prdm4Q80V63 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Prdm4Q80V63 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prdm4Q80V63 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
Prdm4Q80V63 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Prdm4Q80V63 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Prdm4Q80V63 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Prdm4Q80V63 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Gm27502-201ENSMUST00000183495 199 ntBASIC20.96■□□□□ 0.95
Prdm4Q80V63 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.96■□□□□ 0.95
Prdm4Q80V63 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.96■□□□□ 0.95
Prdm4Q80V63 Gm43548-201ENSMUST00000197139 2353 ntBASIC20.96■□□□□ 0.95
Prdm4Q80V63 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.96■□□□□ 0.95
Prdm4Q80V63 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Prdm4Q80V63 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Prdm4Q80V63 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Prdm4Q80V63 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Gspt1-201ENSMUST00000080030 2898 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
Prdm4Q80V63 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Prdm4Q80V63 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Prdm4Q80V63 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Irx5-201ENSMUST00000034184 2450 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Prdm4Q80V63 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.9■□□□□ 0.94
Prdm4Q80V63 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC20.9■□□□□ 0.94
Prdm4Q80V63 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Prdm4Q80V63 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm4Q80V63 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm4Q80V63 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm4Q80V63 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC20.89■□□□□ 0.93
Prdm4Q80V63 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Prdm4Q80V63 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms