Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 Gm13234-201ENSMUST00000120010 747 ntBASIC18.05■□□□□ 0.48
Ubr5Q80TP3 Gm8520-201ENSMUST00000186517 868 ntBASIC18.05■□□□□ 0.48
Ubr5Q80TP3 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.05■□□□□ 0.48
Ubr5Q80TP3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Ubr5Q80TP3 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Ubr5Q80TP3 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Ubr5Q80TP3 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ubr5Q80TP3 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC18.02■□□□□ 0.48
Ubr5Q80TP3 Gm27045-201ENSMUST00000182145 1402 ntBASIC18.02■□□□□ 0.47
Ubr5Q80TP3 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr5Q80TP3 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
Ubr5Q80TP3 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr5Q80TP3 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ubr5Q80TP3 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC18.02■□□□□ 0.47
Ubr5Q80TP3 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ubr5Q80TP3 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Reep4-203ENSMUST00000226563 1444 ntBASIC18■□□□□ 0.47
Ubr5Q80TP3 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ubr5Q80TP3 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
Ubr5Q80TP3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ubr5Q80TP3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Ubr5Q80TP3 Mir5133-201ENSMUST00000174955 77 ntBASIC18■□□□□ 0.47
Ubr5Q80TP3 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ubr5Q80TP3 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Ubr5Q80TP3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ubr5Q80TP3 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 AC135963.1-201ENSMUST00000211640 717 ntBASIC17.98■□□□□ 0.47
Ubr5Q80TP3 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ubr5Q80TP3 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Gm43859-201ENSMUST00000200075 1412 ntBASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
Ubr5Q80TP3 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.96■□□□□ 0.47
Ubr5Q80TP3 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr5Q80TP3 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ubr5Q80TP3 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
Ubr5Q80TP3 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 13.6 ms