Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Ush1gQ80T11 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ush1gQ80T11 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ush1gQ80T11 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Ush1gQ80T11 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Cers5-201ENSMUST00000023762 2096 ntAPPRIS P2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Ush1gQ80T11 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC22.27■■□□□ 1.16
Ush1gQ80T11 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC22.27■■□□□ 1.15
Ush1gQ80T11 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Pnck-202ENSMUST00000114472 1532 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Ush1gQ80T11 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ush1gQ80T11 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Ush1gQ80T11 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Ush1gQ80T11 AC164629.5-201ENSMUST00000220387 632 ntBASIC22.25■■□□□ 1.15
Ush1gQ80T11 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ush1gQ80T11 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC22.25■■□□□ 1.15
Ush1gQ80T11 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Ush1gQ80T11 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Ush1gQ80T11 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC22.24■■□□□ 1.15
Ush1gQ80T11 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Ush1gQ80T11 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC22.24■■□□□ 1.15
Ush1gQ80T11 Gm7143-201ENSMUST00000222811 859 ntBASIC22.24■■□□□ 1.15
Ush1gQ80T11 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Snapin-203ENSMUST00000149884 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Ush1gQ80T11 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC22.22■■□□□ 1.15
Ush1gQ80T11 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
Ush1gQ80T11 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Ush1gQ80T11 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Ush1gQ80T11 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Ush1gQ80T11 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Gm44949-201ENSMUST00000206423 1450 ntBASIC22.2■■□□□ 1.14
Ush1gQ80T11 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Ush1gQ80T11 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Ush1gQ80T11 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ush1gQ80T11 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Ush1gQ80T11 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Ush1gQ80T11 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Ush1gQ80T11 Gm43173-201ENSMUST00000202246 593 ntBASIC22.18■■□□□ 1.14
Ush1gQ80T11 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Ush1gQ80T11 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Ush1gQ80T11 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC22.17■■□□□ 1.14
Ush1gQ80T11 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC22.17■■□□□ 1.14
Ush1gQ80T11 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ush1gQ80T11 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ush1gQ80T11 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Ush1gQ80T11 Gm29257-201ENSMUST00000186115 639 ntBASIC22.16■■□□□ 1.14
Ush1gQ80T11 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Ush1gQ80T11 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 40 ms