Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC18.74■□□□□ 0.59
Pif1Q80SX8 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pif1Q80SX8 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.73■□□□□ 0.59
Pif1Q80SX8 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Gm43173-201ENSMUST00000202246 593 ntBASIC18.73■□□□□ 0.59
Pif1Q80SX8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC18.73■□□□□ 0.59
Pif1Q80SX8 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Gm5874-201ENSMUST00000096101 508 ntBASIC18.73■□□□□ 0.59
Pif1Q80SX8 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Pif1Q80SX8 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Pif1Q80SX8 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pif1Q80SX8 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Pif1Q80SX8 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.71■□□□□ 0.59
Pif1Q80SX8 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pif1Q80SX8 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Pif1Q80SX8 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Gm12251-201ENSMUST00000117893 792 ntBASIC18.7■□□□□ 0.58
Pif1Q80SX8 Gm7160-202ENSMUST00000188519 1027 ntBASIC18.7■□□□□ 0.58
Pif1Q80SX8 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 AC166356.1-201ENSMUST00000228236 1426 ntBASIC18.7■□□□□ 0.58
Pif1Q80SX8 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Gm42418-201ENSMUST00000182010 1831 ntBASIC18.7■□□□□ 0.58
Pif1Q80SX8 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Pif1Q80SX8 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Pif1Q80SX8 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
Pif1Q80SX8 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.69■□□□□ 0.58
Pif1Q80SX8 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pif1Q80SX8 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pif1Q80SX8 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Pif1Q80SX8 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Gm43530-201ENSMUST00000195920 274 ntBASIC18.68■□□□□ 0.58
Pif1Q80SX8 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Pif1Q80SX8 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.67■□□□□ 0.58
Pif1Q80SX8 Notumos-201ENSMUST00000151998 2659 ntBASIC18.67■□□□□ 0.58
Pif1Q80SX8 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pif1Q80SX8 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
Pif1Q80SX8 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pif1Q80SX8 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pif1Q80SX8 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC18.66■□□□□ 0.58
Pif1Q80SX8 AC164629.5-201ENSMUST00000220387 632 ntBASIC18.66■□□□□ 0.58
Pif1Q80SX8 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Pif1Q80SX8 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pif1Q80SX8 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Pif1Q80SX8 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
Pif1Q80SX8 AC124392.1-201ENSMUST00000225172 5324 ntBASIC18.65■□□□□ 0.58
Pif1Q80SX8 Gm6085-201ENSMUST00000182774 1470 ntBASIC18.65■□□□□ 0.58
Pif1Q80SX8 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
Pif1Q80SX8 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.65■□□□□ 0.58
Pif1Q80SX8 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Pif1Q80SX8 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Pif1Q80SX8 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Pif1Q80SX8 Gm26833-201ENSMUST00000180899 440 ntBASIC18.64■□□□□ 0.57
Pif1Q80SX8 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.64■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms