Protein–RNA interactions for Protein: Q7TSK3

Pcdh8, Protocadherin-8, mousemouse

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh8Q7TSK3 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Pcdh8Q7TSK3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Pcdh8Q7TSK3 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Pcdh8Q7TSK3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC20.02■□□□□ 0.79
Pcdh8Q7TSK3 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
Pcdh8Q7TSK3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20■□□□□ 0.79
Pcdh8Q7TSK3 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20■□□□□ 0.79
Pcdh8Q7TSK3 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Pcdh8Q7TSK3 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh8Q7TSK3 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20■□□□□ 0.79
Pcdh8Q7TSK3 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Gm8770-201ENSMUST00000121113 1109 ntBASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Csf2ra-201ENSMUST00000076046 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
Pcdh8Q7TSK3 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Gm43759-201ENSMUST00000196925 1261 ntBASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
Pcdh8Q7TSK3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC19.97■□□□□ 0.79
Pcdh8Q7TSK3 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh8Q7TSK3 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh8Q7TSK3 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC19.97■□□□□ 0.79
Pcdh8Q7TSK3 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
Pcdh8Q7TSK3 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh8Q7TSK3 Mir7075-201ENSMUST00000184187 82 ntBASIC19.96■□□□□ 0.79
Pcdh8Q7TSK3 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Pcdh8Q7TSK3 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Pcdh8Q7TSK3 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Gm6139-201ENSMUST00000079261 882 ntBASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Pcdh8Q7TSK3 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Pcdh8Q7TSK3 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.92■□□□□ 0.78
Pcdh8Q7TSK3 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms