Protein–RNA interactions for Protein: Q7TQI3

Otub1, Ubiquitin thioesterase OTUB1, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otub1Q7TQI3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Otub1Q7TQI3 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Gm10232-201ENSMUST00000089221 720 ntBASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Otub1Q7TQI3 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Otub1Q7TQI3 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Otub1Q7TQI3 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Otub1Q7TQI3 Gm5913-201ENSMUST00000119397 1399 ntBASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Ssbp4-201ENSMUST00000049908 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Otub1Q7TQI3 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otub1Q7TQI3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Otub1Q7TQI3 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Otub1Q7TQI3 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Otub1Q7TQI3 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Gm15820-201ENSMUST00000201566 728 ntBASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Gm4430-201ENSMUST00000192413 1943 ntBASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Bdh1-201ENSMUST00000089759 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Otub1Q7TQI3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Otub1Q7TQI3 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Otub1Q7TQI3 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 71.8 ms