Protein–RNA interactions for Protein: Q71M36

Cspg5, Chondroitin sulfate proteoglycan 5, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg5Q71M36 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cspg5Q71M36 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.93■□□□□ 0.94
Cspg5Q71M36 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cspg5Q71M36 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cspg5Q71M36 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Gm4430-201ENSMUST00000192413 1943 ntBASIC20.92■□□□□ 0.94
Cspg5Q71M36 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cspg5Q71M36 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.91■□□□□ 0.94
Cspg5Q71M36 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cspg5Q71M36 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cspg5Q71M36 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Cspg5Q71M36 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cspg5Q71M36 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC20.89■□□□□ 0.93
Cspg5Q71M36 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cspg5Q71M36 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Cspg5Q71M36 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Cspg5Q71M36 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.87■□□□□ 0.93
Cspg5Q71M36 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Cspg5Q71M36 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.85■□□□□ 0.93
Cspg5Q71M36 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.85■□□□□ 0.93
Cspg5Q71M36 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.85■□□□□ 0.93
Cspg5Q71M36 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Cspg5Q71M36 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms