Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Rnf220Q6PDX6 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Rnf220Q6PDX6 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 AC117769.4-201ENSMUST00000225679 685 ntBASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Gm43403-201ENSMUST00000198011 1786 ntBASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Rnf220Q6PDX6 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 Gm9806-201ENSMUST00000051080 552 ntBASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
Rnf220Q6PDX6 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf220Q6PDX6 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf220Q6PDX6 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf220Q6PDX6 Ptpn18-201ENSMUST00000027302 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
Rnf220Q6PDX6 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf220Q6PDX6 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf220Q6PDX6 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Rnf220Q6PDX6 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
Rnf220Q6PDX6 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Scarna2-201ENSMUST00000157560 414 ntBASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Rnf220Q6PDX6 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Rnf220Q6PDX6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Agap3-205ENSMUST00000199856 2685 ntTSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Rnf220Q6PDX6 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Rnf220Q6PDX6 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Rnf220Q6PDX6 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Rnf220Q6PDX6 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms