Protein–RNA interactions for Protein: Q6P8W9

Hmgb4, High mobility group protein B4, mousemouse

Predictions only

Length 181 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb4Q6P8W9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Hmgb4Q6P8W9 Notumos-201ENSMUST00000151998 2659 ntBASIC21.22■□□□□ 0.99
Hmgb4Q6P8W9 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Hmgb4Q6P8W9 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Hmgb4Q6P8W9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
Hmgb4Q6P8W9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC21.19■□□□□ 0.98
Hmgb4Q6P8W9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Hmgb4Q6P8W9 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
Hmgb4Q6P8W9 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Gm6139-201ENSMUST00000079261 882 ntBASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Hmgb4Q6P8W9 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC21.16■□□□□ 0.98
Hmgb4Q6P8W9 Gm43006-201ENSMUST00000197702 1602 ntBASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Mir7075-201ENSMUST00000184187 82 ntBASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Hsf1-207ENSMUST00000228371 2102 ntBASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.15■□□□□ 0.98
Hmgb4Q6P8W9 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
Hmgb4Q6P8W9 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgb4Q6P8W9 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
Hmgb4Q6P8W9 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.14■□□□□ 0.97
Hmgb4Q6P8W9 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Hmgb4Q6P8W9 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Gm7143-201ENSMUST00000222811 859 ntBASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Hmgb4Q6P8W9 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Hmgb4Q6P8W9 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Gm43017-201ENSMUST00000198296 752 ntBASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Hmgb4Q6P8W9 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Gm8770-201ENSMUST00000121113 1109 ntBASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Gm2011-201ENSMUST00000203124 1263 ntBASIC21.09■□□□□ 0.97
Hmgb4Q6P8W9 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms