Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Sp140Q6NSQ5 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
Sp140Q6NSQ5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
Sp140Q6NSQ5 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sp140Q6NSQ5 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Sp140Q6NSQ5 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Sp140Q6NSQ5 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sp140Q6NSQ5 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sp140Q6NSQ5 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sp140Q6NSQ5 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sp140Q6NSQ5 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sp140Q6NSQ5 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sp140Q6NSQ5 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sp140Q6NSQ5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Gm37035-201ENSMUST00000194809 2148 ntBASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sp140Q6NSQ5 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Kremen2-201ENSMUST00000046525 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sp140Q6NSQ5 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sp140Q6NSQ5 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.58■□□□□ 0.89
Sp140Q6NSQ5 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sp140Q6NSQ5 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sp140Q6NSQ5 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC20.58■□□□□ 0.89
Sp140Q6NSQ5 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.88
Sp140Q6NSQ5 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sp140Q6NSQ5 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sp140Q6NSQ5 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC20.58■□□□□ 0.88
Sp140Q6NSQ5 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC20.58■□□□□ 0.88
Sp140Q6NSQ5 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Gm15546-201ENSMUST00000122095 826 ntBASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Gm42501-201ENSMUST00000200220 1026 ntBASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sp140Q6NSQ5 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Notumos-201ENSMUST00000151998 2659 ntBASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Sp140Q6NSQ5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms