Protein–RNA interactions for Protein: Q6IFX2

Krt42, Keratin, type I cytoskeletal 42, mousemouse

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt42Q6IFX2 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Krt42Q6IFX2 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt42Q6IFX2 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Krt42Q6IFX2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Krt42Q6IFX2 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC20.91■□□□□ 0.94
Krt42Q6IFX2 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Krt42Q6IFX2 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Krt42Q6IFX2 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Krt42Q6IFX2 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.89■□□□□ 0.94
Krt42Q6IFX2 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt42Q6IFX2 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Krt42Q6IFX2 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Ache-209ENSMUST00000196208 1911 ntTSL 5 BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Gm8093-201ENSMUST00000128935 1892 ntBASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Krt42Q6IFX2 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Krt42Q6IFX2 Gm6311-201ENSMUST00000073790 878 ntBASIC20.86■□□□□ 0.93
Krt42Q6IFX2 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt42Q6IFX2 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Krt42Q6IFX2 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt42Q6IFX2 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Krt42Q6IFX2 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
Krt42Q6IFX2 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Gm16437-201ENSMUST00000025669 507 ntBASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Krt42Q6IFX2 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Krt42Q6IFX2 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt42Q6IFX2 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Krt42Q6IFX2 Scarna2-201ENSMUST00000157560 414 ntBASIC20.83■□□□□ 0.93
Krt42Q6IFX2 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
Krt42Q6IFX2 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt42Q6IFX2 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt42Q6IFX2 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
Krt42Q6IFX2 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Krt42Q6IFX2 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Krt42Q6IFX2 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Tbxa2r-201ENSMUST00000105325 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Krt42Q6IFX2 Gm9806-201ENSMUST00000051080 552 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 814.3 ms