Protein–RNA interactions for Protein: Q6A078

Cep290, Centrosomal protein of 290 kDa, mousemouse

Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cep290Q6A078 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cep290Q6A078 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cep290Q6A078 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cep290Q6A078 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
Cep290Q6A078 Siah1b-202ENSMUST00000071667 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.11■□□□□ 0.97
Cep290Q6A078 Gm14281-201ENSMUST00000121700 1294 ntBASIC21.11■□□□□ 0.97
Cep290Q6A078 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 Mir6982-201ENSMUST00000184354 68 ntBASIC21.11■□□□□ 0.97
Cep290Q6A078 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cep290Q6A078 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.11■□□□□ 0.97
Cep290Q6A078 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cep290Q6A078 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cep290Q6A078 Gm13234-201ENSMUST00000120010 747 ntBASIC21.1■□□□□ 0.97
Cep290Q6A078 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.1■□□□□ 0.97
Cep290Q6A078 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC21.1■□□□□ 0.97
Cep290Q6A078 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cep290Q6A078 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC21.1■□□□□ 0.97
Cep290Q6A078 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cep290Q6A078 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cep290Q6A078 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cep290Q6A078 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
Cep290Q6A078 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cep290Q6A078 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cep290Q6A078 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
Cep290Q6A078 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC21.08■□□□□ 0.97
Cep290Q6A078 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.08■□□□□ 0.97
Cep290Q6A078 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cep290Q6A078 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cep290Q6A078 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.08■□□□□ 0.96
Cep290Q6A078 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cep290Q6A078 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cep290Q6A078 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC21.07■□□□□ 0.96
Cep290Q6A078 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC21.07■□□□□ 0.96
Cep290Q6A078 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC21.07■□□□□ 0.96
Cep290Q6A078 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cep290Q6A078 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC21.06■□□□□ 0.96
Cep290Q6A078 Gm3807-201ENSMUST00000193520 1168 ntBASIC21.06■□□□□ 0.96
Cep290Q6A078 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cep290Q6A078 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC21.06■□□□□ 0.96
Cep290Q6A078 Gm13181-201ENSMUST00000120117 1069 ntBASIC21.06■□□□□ 0.96
Cep290Q6A078 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
Cep290Q6A078 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
Cep290Q6A078 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cep290Q6A078 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cep290Q6A078 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cep290Q6A078 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cep290Q6A078 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.05■□□□□ 0.96
Cep290Q6A078 Gm29994-201ENSMUST00000195495 1193 ntBASIC21.05■□□□□ 0.96
Cep290Q6A078 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cep290Q6A078 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cep290Q6A078 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cep290Q6A078 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cep290Q6A078 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cep290Q6A078 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC21.03■□□□□ 0.96
Cep290Q6A078 Gm7514-201ENSMUST00000209475 934 ntBASIC21.03■□□□□ 0.96
Cep290Q6A078 Gm20049-201ENSMUST00000219950 730 ntBASIC21.03■□□□□ 0.96
Cep290Q6A078 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC21.03■□□□□ 0.96
Cep290Q6A078 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC21.03■□□□□ 0.96
Cep290Q6A078 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cep290Q6A078 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cep290Q6A078 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Gm37856-201ENSMUST00000191634 999 ntBASIC21.02■□□□□ 0.96
Cep290Q6A078 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC21.02■□□□□ 0.96
Cep290Q6A078 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Gm29241-201ENSMUST00000189260 1096 ntBASIC21.02■□□□□ 0.96
Cep290Q6A078 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cep290Q6A078 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Cep290Q6A078 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cep290Q6A078 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Cep290Q6A078 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC21.01■□□□□ 0.95
Cep290Q6A078 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cep290Q6A078 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cep290Q6A078 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.01■□□□□ 0.95
Cep290Q6A078 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Cep290Q6A078 Sorcs2-202ENSMUST00000070720 2089 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cep290Q6A078 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 86.9 ms