Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
VclQ64727 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
VclQ64727 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
VclQ64727 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC19.96■□□□□ 0.79
VclQ64727 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
VclQ64727 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC19.95■□□□□ 0.79
VclQ64727 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VclQ64727 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC19.95■□□□□ 0.78
VclQ64727 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VclQ64727 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
VclQ64727 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.95■□□□□ 0.78
VclQ64727 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC19.95■□□□□ 0.78
VclQ64727 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
VclQ64727 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.95■□□□□ 0.78
VclQ64727 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
VclQ64727 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.94■□□□□ 0.78
VclQ64727 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.94■□□□□ 0.78
VclQ64727 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
VclQ64727 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
VclQ64727 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
VclQ64727 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.92■□□□□ 0.78
VclQ64727 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.92■□□□□ 0.78
VclQ64727 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
VclQ64727 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VclQ64727 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VclQ64727 Gm12504-201ENSMUST00000120860 2231 ntBASIC19.92■□□□□ 0.78
VclQ64727 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VclQ64727 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
VclQ64727 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.92■□□□□ 0.78
VclQ64727 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VclQ64727 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.91■□□□□ 0.78
VclQ64727 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VclQ64727 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
VclQ64727 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
VclQ64727 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.91■□□□□ 0.78
VclQ64727 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
VclQ64727 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
VclQ64727 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
VclQ64727 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Camk2b-201ENSMUST00000002817 1872 ntTSL 5 BASIC19.9■□□□□ 0.78
VclQ64727 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
VclQ64727 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
VclQ64727 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.78
VclQ64727 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
VclQ64727 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
VclQ64727 Sp5-201ENSMUST00000100043 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Gm9207-201ENSMUST00000198773 1115 ntBASIC19.88■□□□□ 0.77
VclQ64727 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
VclQ64727 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
VclQ64727 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
VclQ64727 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VclQ64727 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.87■□□□□ 0.77
VclQ64727 Slc22a23-201ENSMUST00000040336 6251 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VclQ64727 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
VclQ64727 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
VclQ64727 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
VclQ64727 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
VclQ64727 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
VclQ64727 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.86■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms