Protein–RNA interactions for Protein: Q64338

Pde1c, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1C, mousemouse

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde1cQ64338 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pde1cQ64338 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pde1cQ64338 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pde1cQ64338 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pde1cQ64338 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pde1cQ64338 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
Pde1cQ64338 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pde1cQ64338 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pde1cQ64338 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pde1cQ64338 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Scamp3-202ENSMUST00000098941 1338 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC22.1■■□□□ 1.13
Pde1cQ64338 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Gm22238-201ENSMUST00000175222 88 ntBASIC22.1■■□□□ 1.13
Pde1cQ64338 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Pde1cQ64338 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pde1cQ64338 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde1cQ64338 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC22.09■■□□□ 1.13
Pde1cQ64338 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde1cQ64338 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pde1cQ64338 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Pde1cQ64338 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC22.09■■□□□ 1.13
Pde1cQ64338 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC22.09■■□□□ 1.13
Pde1cQ64338 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC22.09■■□□□ 1.13
Pde1cQ64338 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pde1cQ64338 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Pde1cQ64338 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
Pde1cQ64338 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.08■■□□□ 1.13
Pde1cQ64338 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.08■■□□□ 1.13
Pde1cQ64338 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
Pde1cQ64338 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Pde1cQ64338 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC22.08■■□□□ 1.12
Pde1cQ64338 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pde1cQ64338 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.12
Pde1cQ64338 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
Pde1cQ64338 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde1cQ64338 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Pde1cQ64338 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Pde1cQ64338 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde1cQ64338 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Pde1cQ64338 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde1cQ64338 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC22.07■■□□□ 1.12
Pde1cQ64338 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Pde1cQ64338 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Pde1cQ64338 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC22.06■■□□□ 1.12
Pde1cQ64338 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.06■■□□□ 1.12
Pde1cQ64338 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Pde1cQ64338 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC22.05■■□□□ 1.12
Pde1cQ64338 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC22.05■■□□□ 1.12
Pde1cQ64338 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.05■■□□□ 1.12
Pde1cQ64338 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.05■■□□□ 1.12
Pde1cQ64338 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC22.05■■□□□ 1.12
Pde1cQ64338 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC22.04■■□□□ 1.12
Pde1cQ64338 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC22.04■■□□□ 1.12
Pde1cQ64338 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.04■■□□□ 1.12
Pde1cQ64338 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Pde1cQ64338 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Pde1cQ64338 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.03■■□□□ 1.12
Pde1cQ64338 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
Pde1cQ64338 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
Pde1cQ64338 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
Pde1cQ64338 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Pde1cQ64338 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Pde1cQ64338 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
Pde1cQ64338 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC22.02■■□□□ 1.12
Pde1cQ64338 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde1cQ64338 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde1cQ64338 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde1cQ64338 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Pde1cQ64338 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms