Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AtmQ62388 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
AtmQ62388 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC19.61■□□□□ 0.73
AtmQ62388 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AtmQ62388 Gm7143-201ENSMUST00000222811 859 ntBASIC19.61■□□□□ 0.73
AtmQ62388 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
AtmQ62388 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AtmQ62388 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
AtmQ62388 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
AtmQ62388 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Gm42778-201ENSMUST00000199644 553 ntBASIC19.6■□□□□ 0.73
AtmQ62388 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
AtmQ62388 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC19.6■□□□□ 0.73
AtmQ62388 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
AtmQ62388 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
AtmQ62388 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
AtmQ62388 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
AtmQ62388 Smad6-203ENSMUST00000179458 273 ntBASIC19.59■□□□□ 0.73
AtmQ62388 Gm43530-201ENSMUST00000195920 274 ntBASIC19.59■□□□□ 0.73
AtmQ62388 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
AtmQ62388 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
AtmQ62388 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC19.58■□□□□ 0.73
AtmQ62388 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.58■□□□□ 0.73
AtmQ62388 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
AtmQ62388 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
AtmQ62388 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
AtmQ62388 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC19.57■□□□□ 0.72
AtmQ62388 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
AtmQ62388 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Junb-201ENSMUST00000064922 1809 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
AtmQ62388 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
AtmQ62388 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
AtmQ62388 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
AtmQ62388 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC19.56■□□□□ 0.72
AtmQ62388 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AtmQ62388 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AtmQ62388 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AtmQ62388 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AtmQ62388 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
AtmQ62388 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AtmQ62388 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AtmQ62388 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.55■□□□□ 0.72
AtmQ62388 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
AtmQ62388 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AtmQ62388 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
AtmQ62388 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AtmQ62388 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
AtmQ62388 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
AtmQ62388 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.54■□□□□ 0.72
AtmQ62388 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.54■□□□□ 0.72
AtmQ62388 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
AtmQ62388 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
AtmQ62388 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
AtmQ62388 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.53■□□□□ 0.72
AtmQ62388 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
AtmQ62388 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
AtmQ62388 AC166356.1-201ENSMUST00000228236 1426 ntBASIC19.53■□□□□ 0.72
AtmQ62388 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
AtmQ62388 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC19.52■□□□□ 0.72
AtmQ62388 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.52■□□□□ 0.72
AtmQ62388 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
AtmQ62388 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
AtmQ62388 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.71
AtmQ62388 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.52■□□□□ 0.71
AtmQ62388 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
AtmQ62388 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
AtmQ62388 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
AtmQ62388 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.51■□□□□ 0.71
AtmQ62388 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
AtmQ62388 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC19.5■□□□□ 0.71
AtmQ62388 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.5■□□□□ 0.71
AtmQ62388 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.5■□□□□ 0.71
AtmQ62388 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
AtmQ62388 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms