Protein–RNA interactions for Protein: Q61115

Ptch1, Protein patched homolog 1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptch1Q61115 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC30.09■■■□□ 2.41
Ptch1Q61115 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptch1Q61115 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC30.09■■■□□ 2.41
Ptch1Q61115 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptch1Q61115 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptch1Q61115 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
Ptch1Q61115 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
Ptch1Q61115 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ptch1Q61115 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ptch1Q61115 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC30.08■■■□□ 2.41
Ptch1Q61115 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC30.08■■■□□ 2.41
Ptch1Q61115 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ptch1Q61115 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Ptch1Q61115 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC30.08■■■□□ 2.41
Ptch1Q61115 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
Ptch1Q61115 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ptch1Q61115 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC30.07■■■□□ 2.4
Ptch1Q61115 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Ptch1Q61115 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ptch1Q61115 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC30.07■■■□□ 2.4
Ptch1Q61115 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ptch1Q61115 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ptch1Q61115 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ptch1Q61115 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
Ptch1Q61115 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC30.05■■■□□ 2.4
Ptch1Q61115 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC30.05■■■□□ 2.4
Ptch1Q61115 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ptch1Q61115 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ptch1Q61115 Cnpy3-201ENSMUST00000059844 1908 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ptch1Q61115 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC30.05■■■□□ 2.4
Ptch1Q61115 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Ptch1Q61115 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ptch1Q61115 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC30.04■■■□□ 2.4
Ptch1Q61115 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Ptch1Q61115 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Snx21-204ENSMUST00000172577 1825 ntTSL 2 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC30.03■■■□□ 2.4
Ptch1Q61115 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC30.03■■■□□ 2.4
Ptch1Q61115 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ptch1Q61115 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ptch1Q61115 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Ptch1Q61115 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ptch1Q61115 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ptch1Q61115 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
Ptch1Q61115 Gm12441-201ENSMUST00000121806 588 ntBASIC30.01■■■□□ 2.39
Ptch1Q61115 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Ptch1Q61115 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ptch1Q61115 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC30■■■□□ 2.39
Ptch1Q61115 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC30■■■□□ 2.39
Ptch1Q61115 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC30■■■□□ 2.39
Ptch1Q61115 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC30■■■□□ 2.39
Ptch1Q61115 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Ptch1Q61115 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC30■■■□□ 2.39
Ptch1Q61115 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Ptch1Q61115 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC29.99■■■□□ 2.39
Ptch1Q61115 Gm9988-201ENSMUST00000069786 435 ntBASIC29.99■■■□□ 2.39
Ptch1Q61115 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC29.99■■■□□ 2.39
Ptch1Q61115 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC29.99■■■□□ 2.39
Ptch1Q61115 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC29.98■■■□□ 2.39
Ptch1Q61115 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ptch1Q61115 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC29.98■■■□□ 2.39
Ptch1Q61115 Gm13234-201ENSMUST00000120010 747 ntBASIC29.98■■■□□ 2.39
Ptch1Q61115 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Ptch1Q61115 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
Ptch1Q61115 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC29.97■■■□□ 2.39
Ptch1Q61115 Reep4-203ENSMUST00000226563 1444 ntBASIC29.97■■■□□ 2.39
Ptch1Q61115 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC29.97■■■□□ 2.39
Ptch1Q61115 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
Ptch1Q61115 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 Gm14281-201ENSMUST00000121700 1294 ntBASIC29.96■■■□□ 2.39
Ptch1Q61115 Ap3s1-204ENSMUST00000225520 957 ntBASIC29.96■■■□□ 2.39
Ptch1Q61115 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 Gm43653-201ENSMUST00000198136 1608 ntTSL 3 BASIC29.96■■■□□ 2.39
Ptch1Q61115 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Ptch1Q61115 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC29.95■■■□□ 2.39
Ptch1Q61115 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC29.95■■■□□ 2.39
Ptch1Q61115 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.38
Ptch1Q61115 Tmem80-208ENSMUST00000145184 1805 ntTSL 5 BASIC29.95■■■□□ 2.38
Ptch1Q61115 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC29.94■■■□□ 2.38
Ptch1Q61115 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC29.94■■■□□ 2.38
Ptch1Q61115 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC29.94■■■□□ 2.38
Ptch1Q61115 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC29.94■■■□□ 2.38
Ptch1Q61115 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC29.94■■■□□ 2.38
Ptch1Q61115 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Mgll-205ENSMUST00000150180 1312 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Ptch1Q61115 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC29.93■■■□□ 2.38
Ptch1Q61115 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms