Protein–RNA interactions for Protein: Q61009

Scarb1, Scavenger receptor class B member 1, mousemouse

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scarb1Q61009 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Scarb1Q61009 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Scarb1Q61009 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.03■□□□□ 0.32
Scarb1Q61009 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC17.03■□□□□ 0.32
Scarb1Q61009 AC116713.1-201ENSMUST00000215074 430 ntBASIC17.03■□□□□ 0.32
Scarb1Q61009 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scarb1Q61009 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.03■□□□□ 0.32
Scarb1Q61009 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.03■□□□□ 0.32
Scarb1Q61009 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Scarb1Q61009 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scarb1Q61009 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.32
Scarb1Q61009 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scarb1Q61009 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scarb1Q61009 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scarb1Q61009 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scarb1Q61009 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scarb1Q61009 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.02■□□□□ 0.32
Scarb1Q61009 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.02■□□□□ 0.32
Scarb1Q61009 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scarb1Q61009 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.01■□□□□ 0.31
Scarb1Q61009 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Scarb1Q61009 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
Scarb1Q61009 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.01■□□□□ 0.31
Scarb1Q61009 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Azi2-205ENSMUST00000133580 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scarb1Q61009 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Scarb1Q61009 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Scarb1Q61009 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
Scarb1Q61009 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scarb1Q61009 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC16.99■□□□□ 0.31
Scarb1Q61009 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Scarb1Q61009 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Scarb1Q61009 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC16.99■□□□□ 0.31
Scarb1Q61009 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Gm11614-201ENSMUST00000137598 736 ntTSL 5 BASIC16.99■□□□□ 0.31
Scarb1Q61009 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Scarb1Q61009 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Scarb1Q61009 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.97■□□□□ 0.31
Scarb1Q61009 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC16.97■□□□□ 0.31
Scarb1Q61009 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC16.97■□□□□ 0.31
Scarb1Q61009 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Stau2-217ENSMUST00000162751 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Dlg3-204ENSMUST00000113736 4940 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Scarb1Q61009 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC16.96■□□□□ 0.31
Scarb1Q61009 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC16.96■□□□□ 0.31
Scarb1Q61009 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC16.96■□□□□ 0.31
Scarb1Q61009 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
Scarb1Q61009 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Scarb1Q61009 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms