Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Slc6a4Q60857 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Serp2-204ENSMUST00000228055 705 ntBASIC20.9■□□□□ 0.94
Slc6a4Q60857 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Slc6a4Q60857 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Slc6a4Q60857 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a4Q60857 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.88■□□□□ 0.93
Slc6a4Q60857 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a4Q60857 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Slc6a4Q60857 Mir7075-201ENSMUST00000184187 82 ntBASIC20.88■□□□□ 0.93
Slc6a4Q60857 Gm6139-201ENSMUST00000079261 882 ntBASIC20.88■□□□□ 0.93
Slc6a4Q60857 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a4Q60857 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.88■□□□□ 0.93
Slc6a4Q60857 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Slc6a4Q60857 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.88■□□□□ 0.93
Slc6a4Q60857 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.87■□□□□ 0.93
Slc6a4Q60857 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC20.87■□□□□ 0.93
Slc6a4Q60857 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Slc6a4Q60857 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Prkar1b-201ENSMUST00000026973 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.86■□□□□ 0.93
Slc6a4Q60857 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC20.86■□□□□ 0.93
Slc6a4Q60857 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
Slc6a4Q60857 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a4Q60857 AC122428.2-201ENSMUST00000216321 1832 ntBASIC20.85■□□□□ 0.93
Slc6a4Q60857 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Slc6a4Q60857 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.85■□□□□ 0.93
Slc6a4Q60857 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a4Q60857 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a4Q60857 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a4Q60857 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Slc6a4Q60857 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.84■□□□□ 0.93
Slc6a4Q60857 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Slc6a4Q60857 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 Gm12251-201ENSMUST00000117893 792 ntBASIC20.83■□□□□ 0.93
Slc6a4Q60857 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Slc6a4Q60857 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
Slc6a4Q60857 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Slc6a4Q60857 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC20.82■□□□□ 0.92
Slc6a4Q60857 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slc6a4Q60857 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Slc6a4Q60857 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
Slc6a4Q60857 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
Slc6a4Q60857 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms