Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col12a1Q60847 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col12a1Q60847 Gm20760-201ENSMUST00000179197 648 ntBASIC20.56■□□□□ 0.88
Col12a1Q60847 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC20.56■□□□□ 0.88
Col12a1Q60847 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC20.56■□□□□ 0.88
Col12a1Q60847 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col12a1Q60847 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col12a1Q60847 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col12a1Q60847 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
Col12a1Q60847 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Col12a1Q60847 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Col12a1Q60847 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
Col12a1Q60847 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Jsrp1-203ENSMUST00000181039 1108 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Col12a1Q60847 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Gm13148-201ENSMUST00000118892 745 ntBASIC20.55■□□□□ 0.88
Col12a1Q60847 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Col12a1Q60847 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.54■□□□□ 0.88
Col12a1Q60847 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC20.54■□□□□ 0.88
Col12a1Q60847 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col12a1Q60847 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.53■□□□□ 0.88
Col12a1Q60847 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC20.53■□□□□ 0.88
Col12a1Q60847 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Prkar2b-201ENSMUST00000003079 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Foxj3-209ENSMUST00000162267 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Reep4-203ENSMUST00000226563 1444 ntBASIC20.53■□□□□ 0.88
Col12a1Q60847 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col12a1Q60847 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col12a1Q60847 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC20.52■□□□□ 0.88
Col12a1Q60847 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col12a1Q60847 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col12a1Q60847 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Col12a1Q60847 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
Col12a1Q60847 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC20.51■□□□□ 0.87
Col12a1Q60847 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC20.51■□□□□ 0.87
Col12a1Q60847 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col12a1Q60847 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC20.51■□□□□ 0.87
Col12a1Q60847 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col12a1Q60847 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col12a1Q60847 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col12a1Q60847 Sdf2l1-201ENSMUST00000023453 1108 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col12a1Q60847 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC20.51■□□□□ 0.87
Col12a1Q60847 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
Col12a1Q60847 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Col12a1Q60847 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col12a1Q60847 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC20.49■□□□□ 0.87
Col12a1Q60847 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC20.49■□□□□ 0.87
Col12a1Q60847 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC20.49■□□□□ 0.87
Col12a1Q60847 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Col12a1Q60847 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.49■□□□□ 0.87
Col12a1Q60847 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC20.49■□□□□ 0.87
Col12a1Q60847 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
Col12a1Q60847 Gm8520-201ENSMUST00000186517 868 ntBASIC20.49■□□□□ 0.87
Col12a1Q60847 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col12a1Q60847 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col12a1Q60847 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Col12a1Q60847 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
Col12a1Q60847 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col12a1Q60847 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col12a1Q60847 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
Col12a1Q60847 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col12a1Q60847 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col12a1Q60847 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col12a1Q60847 Mir5133-201ENSMUST00000174955 77 ntBASIC20.47■□□□□ 0.87
Col12a1Q60847 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC20.47■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms