Protein–RNA interactions for Protein: Q60649

Clpb, Caseinolytic peptidase B protein homolog, mousemouse

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpbQ60649 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ClpbQ60649 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.46■□□□□ 0.71
ClpbQ60649 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ClpbQ60649 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ClpbQ60649 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClpbQ60649 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ClpbQ60649 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClpbQ60649 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
ClpbQ60649 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ClpbQ60649 Kctd8-202ENSMUST00000087231 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ClpbQ60649 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.44■□□□□ 0.7
ClpbQ60649 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
ClpbQ60649 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
ClpbQ60649 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
ClpbQ60649 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClpbQ60649 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ClpbQ60649 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC19.43■□□□□ 0.7
ClpbQ60649 Gm15039-201ENSMUST00000118914 875 ntBASIC19.43■□□□□ 0.7
ClpbQ60649 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
ClpbQ60649 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ClpbQ60649 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
ClpbQ60649 Wipi1-202ENSMUST00000103060 2050 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
ClpbQ60649 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ClpbQ60649 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.42■□□□□ 0.7
ClpbQ60649 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
ClpbQ60649 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC19.42■□□□□ 0.7
ClpbQ60649 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
ClpbQ60649 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ClpbQ60649 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClpbQ60649 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClpbQ60649 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
ClpbQ60649 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClpbQ60649 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
ClpbQ60649 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC19.41■□□□□ 0.7
ClpbQ60649 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
ClpbQ60649 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
ClpbQ60649 Gm10612-201ENSMUST00000162198 1681 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ClpbQ60649 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClpbQ60649 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClpbQ60649 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
ClpbQ60649 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
ClpbQ60649 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClpbQ60649 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClpbQ60649 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
ClpbQ60649 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC19.39■□□□□ 0.69
ClpbQ60649 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.39■□□□□ 0.69
ClpbQ60649 Gm9847-201ENSMUST00000052528 599 ntBASIC19.39■□□□□ 0.69
ClpbQ60649 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 Tmem178-201ENSMUST00000025092 1696 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
ClpbQ60649 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ClpbQ60649 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClpbQ60649 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClpbQ60649 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClpbQ60649 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
ClpbQ60649 Gm13241-201ENSMUST00000094493 780 ntBASIC19.38■□□□□ 0.69
ClpbQ60649 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
ClpbQ60649 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ClpbQ60649 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ClpbQ60649 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ClpbQ60649 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
ClpbQ60649 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.37■□□□□ 0.69
ClpbQ60649 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ClpbQ60649 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClpbQ60649 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClpbQ60649 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ClpbQ60649 Gm12922-201ENSMUST00000120626 809 ntBASIC19.36■□□□□ 0.69
ClpbQ60649 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.36■□□□□ 0.69
ClpbQ60649 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms