Protein–RNA interactions for Protein: Q60596

Xrcc1, DNA repair protein XRCC1, mousemouse

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrcc1Q60596 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Xrcc1Q60596 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xrcc1Q60596 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.44■□□□□ 0.7
Xrcc1Q60596 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xrcc1Q60596 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Xrcc1Q60596 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Xrcc1Q60596 Gm6277-202ENSMUST00000224036 2779 ntBASIC19.44■□□□□ 0.7
Xrcc1Q60596 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 Gm21956-201ENSMUST00000179946 522 ntBASIC19.43■□□□□ 0.7
Xrcc1Q60596 Gm43034-201ENSMUST00000198678 1364 ntBASIC19.43■□□□□ 0.7
Xrcc1Q60596 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Xrcc1Q60596 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Gm572-201ENSMUST00000105698 1385 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Xrcc1Q60596 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Spast-202ENSMUST00000224711 2066 ntAPPRIS ALT2 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Xrcc1Q60596 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Xrcc1Q60596 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Xrcc1Q60596 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC19.4■□□□□ 0.7
Xrcc1Q60596 Bcl3-201ENSMUST00000120537 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Xrcc1Q60596 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Xrcc1Q60596 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Xrcc1Q60596 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC19.39■□□□□ 0.7
Xrcc1Q60596 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Xrcc1Q60596 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Xrcc1Q60596 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 Dedd-203ENSMUST00000111299 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 AC122428.2-201ENSMUST00000216321 1832 ntBASIC19.37■□□□□ 0.69
Xrcc1Q60596 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Xrcc1Q60596 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Xrcc1Q60596 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Gm43530-201ENSMUST00000195920 274 ntBASIC19.35■□□□□ 0.69
Xrcc1Q60596 AC140930.3-201ENSMUST00000222935 274 ntBASIC19.35■□□□□ 0.69
Xrcc1Q60596 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Xrcc1Q60596 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.34■□□□□ 0.69
Xrcc1Q60596 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Xrcc1Q60596 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Xrcc1Q60596 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Xrcc1Q60596 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 36.7 ms