Protein–RNA interactions for Protein: Q5XFR0

Pabpn1l, Embryonic polyadenylate-binding protein 2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pabpn1lQ5XFR0 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Cap2-205ENSMUST00000225824 1634 ntBASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Alx3-201ENSMUST00000014747 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Pabpn1lQ5XFR0 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Pabpn1lQ5XFR0 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Pabpn1lQ5XFR0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 AI115009-201ENSMUST00000181093 1853 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pabpn1lQ5XFR0 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pabpn1lQ5XFR0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Scarna2-201ENSMUST00000157560 414 ntBASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pabpn1lQ5XFR0 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Pabpn1lQ5XFR0 Dapk1-207ENSMUST00000226059 5009 ntBASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Pabpn1lQ5XFR0 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC20.17■□□□□ 0.82
Pabpn1lQ5XFR0 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpn1lQ5XFR0 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Pabpn1lQ5XFR0 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms